Genome Comparative Analysis
Explore a comprehensive bioinformatics tutorial focused on bacterial genome analysis and comparative genomics. Learn to create phylogenetic trees using MUSCLE and PHYML, identify insertion sequence elements in genomes with ISfinder, and visualize genomes using online tools like CGView and Artemis (DNAPlotter). Gain hands-on experience in pangenome analysis of bacterial genomes, identify antimicrobial resistance genes using Abricate, and construct phylogenetic trees based on gene sequences. Master the use of RAxML and iTOL for building phylogenetic trees, and delve into genome assembly using ONT reads with FLYE. This in-depth tutorial provides essential skills for beginners in bioinformatics, covering a wide range of tools and techniques crucial for genomic analysis.