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#Transcriptomics

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Bioinformatics Coach

Transcriptomics

1 rewiews
Comprehensive guide to RNA-Seq analysis, covering data processing, visualization techniques like volcano plots and heatmaps, and practical applications using R and Galaxy.
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3 Lesons
3 hours 30 minutes
On-Demand
Free-Video
NPTEL

Functional Genomics

0 rewiews
Explore genomics, epigenetics, and DNA sequencing methods. Learn about genome editing, transcriptomics, and comparative genomics. Gain hands-on experience through tutorials and laboratory sessions.
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19 Lesons
11 hours
On-Demand
Free-Video
Broad Institute

Beyond Cells: The Importance of Gene Programs and Tissue Context

0 rewiews
Explore gene programs and tissue context beyond individual cells, uncovering novel insights into pressing biomedical questions through advanced machine learning techniques.
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1 Lesons
1 hour 7 minutes
On-Demand
Free-Video
Broad Institute

A Practical Guide to Bulk RNA-seq, Including Guidelines for eQTL Analysis - 2024

0 rewiews
Explore practical bulk RNA-seq techniques and eQTL analysis guidelines in this comprehensive guide for medical and population genetics researchers.
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1 Lesons
45 minutes
On-Demand
Free-Video
Broad Institute

Contrastive Models for Case-Control Changes in Sequencing - Models, Inference and Algorithms

0 rewiews
Explore contrastive latent variable models for analyzing differential expression in sequencing data, enhancing case-control comparisons in transcriptomics with novel approaches to capture condition-specific variations.
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1 Lesons
1 hour 8 minutes
On-Demand
Free-Video
Broad Institute

Individual-level Tissue-Specific Imputed Transcriptomes in Drug Target Prioritization and Disease Risk Prediction

0 rewiews
Explore tissue-specific transcriptomes for drug target prioritization and disease risk prediction. Learn about TWAS, co-localization, polygenic risk scores, and phenome-wide scans in genetics research.
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11 Lesons
39 minutes
On-Demand
Free-Video
Broad Institute

Copy Number Alterations in Slide-seq Data - MPG Primer 2023

0 rewiews
Explore spatial copy number alteration detection in Slide-seq-like spatial transcriptomics data. Learn basic genetics principles related to human populations and disease.
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1 Lesons
55 minutes
On-Demand
Free-Video
Broad Institute

Spatial and Single Cell Diversity of Cells and Humans

0 rewiews
Explore spatial and single-cell diversity in humans, examining how our surroundings influence cellular and individual variations through cutting-edge genomic research.
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1 Lesons
1 hour 18 minutes
On-Demand
Free-Video
Houston Methodist DeBakey CV Education

Foundation Application to Link Spatial Transcriptomics to Clinical Images - Research Day

0 rewiews
Explore a foundation application linking spatial transcriptomics to clinical images in cardiovascular research, enhancing understanding of molecular mechanisms in heart disease.
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1 Lesons
25 minutes
On-Demand
Free-Video
Cardiology University of Washington

Regulators of Fibroblast Fate and Fibrosis in Cardiac Response to Myocardial Infarction

0 rewiews
Uncover the role of fibroblasts in cardiac response to myocardial infarction and explore how transcriptome modifications impact heart recovery and fibrosis in acute and chronic stress.
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1 Lesons
40 minutes
On-Demand
Free-Video
Anyscale

Foundation Models in Drug Discovery - Ray Summit 2024

0 rewiews
Explore how foundation models are revolutionizing drug discovery across multiple biological domains. Gain insights into Recursion's large-scale approach using GPUs, robotics, and petabytes of data to transform pharmaceutical innovation.
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1 Lesons
21 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Categorization of 31 Computational Methods to Detect Spatially Variable Genes from Spatially Resolved Transcriptomics Data

0 rewiews
Explore 31 computational methods for detecting spatially variable genes in transcriptomics data, categorized for effective analysis and application in genomics research.
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1 Lesons
50 minutes
On-Demand
Free-Video
Swiss Institute of Bioinformatics

Learn About Bgee - Gene Expression Tool

0 rewiews
Explore Bgee, a database for comparing gene expression across animal species. Learn data integration, tools, and applications in cancer, agriculture, and evolutionary biology.
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7 Lesons
6 hours
On-Demand
Free-Video
The National Centre for Research Methods

The Use of Biomarkers in Social Science Research

0 rewiews
Explore biomarkers in social science research, covering topics from height and weight to omics data and epigenetics, and their impact on disease risk and social interactions.
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8 Lesons
4 hours 30 minutes
On-Demand
Free-Video

Comparative Genomics Course Lectures

0 rewiews
Explore genomics from evolution to human health, covering prokaryotes, eukaryotes, transcriptomics, epigenetics, and more. Gain insights into cutting-edge biological research and applications.
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14 Lesons
12 hours
On-Demand
Free-Video
Labroots

Neuropathology of SARS-CoV-2 as Revealed by Spatial Biology

0 rewiews
Explore SARS-CoV-2's neuropathology through spatial biology. Discover infected brain barrier cells, interferon-gamma signaling in hiPSC-derived BCECs, and gene expression analysis using spatial transcriptomics in FFPE tissue sections.
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23 Lesons
49 minutes
On-Demand
Free-Video
Georgia Tech Research

AI and Machine Learning in Single Cell Genomics - Day 2

0 rewiews
Explore cutting-edge single-cell genomics research, featuring expert talks on spatial transcriptomics, multi-omics, and bioinformatics from leading institutions in Atlanta and across America.
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10 Lesons
7 hours 6 minutes
On-Demand
Free-Video
Georgia Tech Research

AWSOM24 Conference - AI and Machine Learning in Single Cell Genomics

0 rewiews
Explore cutting-edge single-cell genomics research with expert talks on bioinformatics, experimental applications, and translational studies in this comprehensive workshop from leading institutions.
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17 Lesons
7 hours 20 minutes
On-Demand
Free-Video
Manolis Kellis

Single Cell Analysis in Computational Biology - Lecture 3

0 rewiews
Comprehensive exploration of single-cell RNA sequencing, covering technologies, applications, and analysis techniques. Discusses advantages over bulk sequencing and addresses key biological questions in the field.
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18 Lesons
1 hour 20 minutes
On-Demand
Free-Video
Labroots

Attain Successful Single-Cell Sequencing Results with Latest Cell and Nuclei Isolation Workflows

0 rewiews
Explore cutting-edge single-cell sequencing techniques and workflows for successful whole transcriptome profiling. Learn from experts about revolutionary technologies enabling parallel analysis of thousands of cells.
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1 Lesons
45 minutes
On-Demand
Free-Video
Labroots

A Spatially-Resolved Transcriptional Atlas of the Murine Dorsal Pontine Tegmentum

0 rewiews
Explore a groundbreaking transcriptional atlas of the murine dorsal pontine tegmentum using snRNA-seq and MERFISH, with interactive visualization for real-time data analysis and insights.
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1 Lesons
40 minutes
On-Demand
Free-Video
Labroots

Unveiling Insights: Leveraging Single-Cell Transcriptomics and Epigenomics for Biomarker Discovery

0 rewiews
Explore single-cell genomics techniques for identifying biomarkers in cancer research. Learn about transcriptomics, epigenomics, and their applications in understanding biological processes and tumor development.
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1 Lesons
57 minutes
On-Demand
Free-Video
Labroots

Practical Considerations and Best Practices for Single Cell and Spatial Transcriptomics

0 rewiews
Explore best practices for single cell and spatial transcriptomics, uncovering complex biological systems with high-resolution approaches. Gain insights from an expert in genomics and earn PACE credits.
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1 Lesons
27 minutes
On-Demand
Free-Video
Labroots

Studying Promoter and Isoform Diversity with Long-Read Transcriptome Sequencing

0 rewiews
Explore promoter and isoform diversity in cancer transcriptomes using long-read RNA sequencing. Gain insights into alternative promoters' role in gene regulation and their impact on cancer research.
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1 Lesons
32 minutes
On-Demand
Free-Video
MITCBMM

Big Science, Team Science & Open Science to Understand Neocortex

0 rewiews
Explore the human brain's complexity through big science, team science, and open science approaches, focusing on neocortex understanding and innovative research methods.
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32 Lesons
1 hour 8 minutes
On-Demand
Free-Video
Simons Institute

Allen Institute Large-Scale Datasets and Modeling Tools

0 rewiews
Explore large-scale datasets and modeling tools for brain research, covering transcriptomics, connectome mapping, visual coding, and human neuron studies to advance our understanding of brain function.
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15 Lesons
1 hour 36 minutes
On-Demand
Free-Video
Imperial College London

Maps, Molecules and Malignancies

0 rewiews
Explore the intersection of geography, molecular biology, and cancer research to uncover innovative approaches in understanding and treating malignancies.
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1 Lesons
1 hour 6 minutes
On-Demand
Free-Video
Stanford Department of Medicine

Leveraging Advancements in Genomics to Prevent Gastric Cancer

0 rewiews
Explore genomic advancements in gastric cancer prevention, focusing on integrative cellular genomics, spatial transcriptomics, and gene mapping techniques for metaplasia and dysplasia.
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21 Lesons
15 minutes
On-Demand
Free-Video
Labroots

Fully Automated Workflows for High-Plex Multi-omic Profiling with GeoMx Digital Spatial Profiler

0 rewiews
Explore automated workflows for high-plex multi-omic profiling using GeoMx® Digital Spatial Profiler and BOND RX/RXm Research Stainer, enhancing throughput and reproducibility in translational research.
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1 Lesons
38 minutes
On-Demand
Free-Video
Labroots

Visualizing In Situ Single-Cell Multi-Omic Gene Expression from FFPE Tissue with MERSCOPE

0 rewiews
Explore MERSCOPE's advanced capabilities for visualizing single-cell gene expression in FFPE tissue, including protein co-detection and enhanced sample processing for deeper biological insights.
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1 Lesons
38 minutes
On-Demand
Free-Video
Cancer Genomics Consortium

Deconvoluting the Heterogeneous Signatures of B-cell Acute Lymphoblastic Leukemia

0 rewiews
Explore genomic signatures of B-cell acute lymphoblastic leukemia subtypes and their impact on classification, diagnosis, and treatment strategies for improved patient outcomes.
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1 Lesons
1 hour 2 minutes
On-Demand
Free-Video
Cancer Genomics Consortium

Overcoming Challenges of Somatic RNA Variant Calling in Solid Tumors

0 rewiews
Explore techniques for accurate somatic RNA variant calling in solid tumors, addressing key challenges and improving cancer genomics analysis.
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1 Lesons
17 minutes
On-Demand
Free-Video
Center for Physical Genomics and Engineering

Genomics and Transcriptomics of Heart Disease

0 rewiews
Explore genomics and transcriptomics in heart disease, focusing on regulatory elements, SNPs, and gene networks to enhance understanding of cardiovascular pathogenesis and therapy.
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1 Lesons
49 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Integrating Multiple Omic Data to Improve Mechanistic Understanding and Prediction

0 rewiews
Explore integrating multiple omic data to enhance mechanistic understanding and prediction in genomics. Learn techniques for improving data interpretation and predictive modeling in computational biology.
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1 Lesons
39 minutes
On-Demand
Free-Video
Labroots

Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics

0 rewiews
Explore spatially resolved, single-cell transcriptomics to understand tissue organization and cellular heterogeneity in biological systems, presented by Vizgen co-founder Jiang He.
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1 Lesons
26 minutes
On-Demand
Free-Video
Labroots

The Evolution of Precision Diagnostics in Advancing Treatment Strategies of Solid Tumors

0 rewiews
Explore advancements in multi-omic approaches for comprehensive tumor analysis, accelerating precision medicine development while addressing challenges in diagnostic laboratory integration.
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1 Lesons
50 minutes
On-Demand
Free-Video
Labroots

Selective Neuronal Vulnerability in Neurodegeneration

0 rewiews
Explore selective neuronal vulnerability in neurodegeneration, focusing on Spinocerebellar Ataxia type 1. Gain insights into cerebellar degeneration patterns and potential underlying mechanisms.
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1 Lesons
28 minutes
On-Demand
Free-Video
Labroots

Linking Single-Cell Function to Multi-omic Analysis Using 'Lab on a Particle' Technology

0 rewiews
Explore innovative 'Lab on a Particle' technology for single-cell analysis, linking cell function to multi-omic data. Learn about hydrogel microparticles for cell capture and secretion analysis in various applications.
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1 Lesons
43 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

SPLASH: Statistical Signal Extraction for Unified Genomic Discovery

0 rewiews
Explore SPLASH, a statistical algorithm for efficient genomic discovery. Learn about its applications in microbial sequencing, transcriptomics, and scientific research.
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1 Lesons
42 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Dissecting the Gene Regulatory Grammar at a Single Cell Resolution

0 rewiews
Explore gene regulatory mechanisms at single-cell resolution. Discover cutting-edge techniques for analyzing multimodal data and constructing regulatory networks in genomics research.
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1 Lesons
30 minutes
On-Demand
Free-Video
Broad Institute

Measuring Gene Expression in Tissues for Autoimmune Disease Detection - Lecture 2

0 rewiews
Dive into advanced techniques for measuring gene expression in tissues, focusing on spatial transcriptomics and its application in inflammatory bowel disease diagnosis and cancer detection.
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1 Lesons
10 minutes
On-Demand
Free-Video
Open Data Science

Interpretable Machine Learning to Model Drug Perturbations in Single Cell Genomics

0 rewiews
Explore interpretable machine learning for modeling drug effects on single-cell genomics. Learn about deep autoencoders, manifold identification, and predicting novel perturbations in cellular states.
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12 Lesons
36 minutes
On-Demand
Free-Video
Paul G. Allen School

Computer Vision to Phenotype Human Diseases Across Physical and Molecular Scales

0 rewiews
Innovative computer vision algorithms for disease phenotyping across scales, from video-based heart function assessment to spatial transcriptomics and immune cell dynamics, with focus on robust and human-compatible AI.
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1 Lesons
1 hour
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Machine Learning Models for Single Cell and Regulatory Genomics - CGSI 2023

0 rewiews
Explore machine learning models for single-cell and regulatory genomics, focusing on recent research and applications in computational biology.
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1 Lesons
48 minutes
On-Demand
Free-Video
Animated biology With arpan

Single Cell RNA Sequencing Overview: ScRNA-seq vs Bulk Seq and Chemistry - Bio Techniques

0 rewiews
Explore single-cell RNA sequencing: overview, comparison with bulk sequencing, chemistry, and techniques. Gain insights into this advanced genomic analysis method.
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8 Lesons
18 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Spatial Modeling of Single-Cell Data Using Deep Learning

0 rewiews
Explore deep learning approaches for spatial modeling of single-cell data, focusing on Hi-C reads imputation and transcriptomic data prediction through graph-based methodologies.
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1 Lesons
30 minutes
On-Demand
Free-Video
Valence Labs

Multimodal Language Models for Mapping the Genotype-Phenotype Relationship

0 rewiews
Explore multimodal language models for mapping genotype-phenotype relationships. Learn about integrated genetics frameworks and their applications in analyzing cellular heterogeneity and gene polyfunctionality.
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8 Lesons
57 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Integrating -omic Data Across Datasets and Layers

0 rewiews
Explore techniques for integrating -omic data across datasets and layers, focusing on redundancy, neural networks, and genetic associations in cancer research.
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1 Lesons
30 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Computational Deconvolution of Cancer Genomes and Transcriptomes - CGSI 2022

0 rewiews
Explore computational methods for deconvoluting cancer genomes and transcriptomes. Learn advanced techniques to analyze tumor heterogeneity and uncover molecular phenotypes shaping clinical outcomes in cancer research.
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1 Lesons
42 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Alignment, Integration, and Modeling of Spatial Transcriptomics Data

0 rewiews
Explore alignment, integration, and modeling techniques for spatial transcriptomics data, focusing on innovative approaches to analyze gene expression patterns in tissue samples.
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1 Lesons
43 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Inference of Gene Regulatory Networks from Bulk and Single Cell Omic Datasets

0 rewiews
Explore gene regulatory network inference techniques using bulk and single-cell omic datasets. Learn about integrative approaches, predictive models, and applications in cellular reprogramming and single-cell genomics.
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25 Lesons
42 minutes
On-Demand
Free-Video
Computational Genomics Summer Institute CGSI

Models and Methods for Spatial Transcriptomics - CGSI 2023

0 rewiews
Explore models and methods for spatial transcriptomics, focusing on alignment, integration, and modeling of gene expression variation in spatially resolved data.
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1 Lesons
41 minutes
On-Demand
Free-Video
MICDE University of Michigan

Introduction to Tokenizing Scientific Data - Omics - Tutorial 2

0 rewiews
Explore tokenization techniques for scientific data in omics, focusing on applications in genomics and bioinformatics.
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1 Lesons
44 minutes
On-Demand
Free-Video
Center for Physical Genomics and Engineering

Investigating Rapid Nuclear Mechanotransduction by Mapping Genome-wide Changes in Transcription

0 rewiews
Explore groundbreaking research on nuclear mechanotransduction, examining how mechanical forces trigger rapid genomic changes and gene activation through advanced sequencing techniques and cellular observations.
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1 Lesons
1 hour 3 minutes
On-Demand
Free-Video
Institute for Pure & Applied Mathematics (IPAM)

Metabolic Division of Labor Creates Organismal Cohesion

0 rewiews
Explore how metabolic division of labor in ant colonies creates complex superorganisms, examining social transfers, resource allocation, and evolutionary implications for collective systems and organisms.
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1 Lesons
52 minutes
On-Demand
Free-Video