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1
Introduction
2
Outline
3
Spectral networks
4
Spatial networks
5
Computational pathology
6
Cell graphs
7
Cell graph convolutional network
8
Method overview
9
Cell graph construction
10
What is graph adaptive glossage
11
What is adaptive glossage
12
Node embedding
13
Graph clustering
14
Graph class
15
Concatenation
16
Experiments
17
Cluster assignments
18
Cluster interpretation
19
Cancer grading
20
Nuclear sampling
21
Overview
22
Graph construction
23
Graph new network
24
Quick question
25
Paper
26
Drawbacks
27
Posthoc graph expanders
28
Histograms
29
Separability Score
30
Aggregate
31
Final Score
32
Risk Score
33
Data Set
34
Qualitative Assessment
35
Quantitative Assessment
36
Personal takeaways
37
Domain expertise
38
Explanation explainers
39
Graph neighborhood sampling
40
Questions
Description:
Explore graph-based modeling techniques in computational pathology through this comprehensive lecture by Stanford University PhD candidate Siyi Tang. Delve into the emerging field of leveraging cellular interactions and spatial structures in whole slide images using graph neural networks. Learn about spectral and spatial networks, cell graph construction, adaptive glossage, node embedding, and graph clustering. Examine experiments in cluster assignments, cancer grading, and nuclear sampling. Analyze drawbacks, post-hoc graph expanders, and evaluation metrics like separability scores. Gain insights into qualitative and quantitative assessments, as well as personal takeaways on domain expertise and explanation methods. Engage with cutting-edge research aimed at developing better medical machine learning models and enabling novel scientific discoveries in pathology.

MedAI- Graph-Based Modeling in Computational Pathology - Siyi Tang

Stanford University
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