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Introduction
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The main problem
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The human genome
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One fundamental puzzle
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How does a single letter change
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Complex networks
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Model organisms
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How we started answering the first question
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What happens if we are outside of the genes
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Deep convolutional neural net
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Neanderthal genome
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Does it actually work
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Humanbase
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Cross organism networks
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Naive Bayesian classifier
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Semisupervised training
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Free time
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How do we study these mechanisms
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Can we systematically integrate model organism information with the human quantitative genetic studies
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Parkinsons disease
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Top genes
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Bodybuilding
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Keynote
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Proteinprotein interactions
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Dynamics with networks
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Suppressor screens
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Subsampling
Description:
Explore data-driven approaches to understanding human disease in this Allen School Distinguished Lecture by Princeton's Olga Troyanskaya. Delve into the development and application of machine learning methods, including deep learning, Bayesian, and semi-supervised approaches, for biomedical data analysis. Discover how researchers tackle challenges in interpreting noncoding DNA, unraveling tissue-specific gene expression signals, mapping genetic circuits in disease-relevant cell types, and integrating biological knowledge from model organisms with human observations. Learn about innovative methods addressing these challenges and their applications to autism, Parkinson's, and cardiovascular disease. Gain insights into the genomic architecture of disease, the complexities of DNA sequences in different organs, and the use of model organisms in human disease research. Follow Troyanskaya's journey through computational biology, bridging computer science and molecular biology to develop better methods for analyzing diverse genomic data and modeling protein function and interactions in biological pathways. Read more

Data-Driven Understanding of Human Disease: From Machine Learning Methods to Biological Discoveries

Paul G. Allen School
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