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1
Introduction
2
Outline
3
Etiology to Mesenchymal Transition
4
Confocal Microscopy
5
Cell Segmentation
6
Cell Model
7
Simulation Results
8
Parameters
9
Parameter sweeps
10
TDA
11
Phase Diagram
12
Proliferation to Robustness
13
Average Persistence Diagram
14
Robustness
15
Nondimensional parameters
16
Summary
17
Limitations
18
Experiment
19
Experimental Results
20
Previous strategy
21
Persistence images
22
Simulations
23
Unsupervised Classification
24
Results
25
Discussion
26
Conclusion
27
Ongoing work
28
Future work
29
Future directions
Description:
Explore data-driven modeling and topological data analysis (TDA) of self-organized multicellular architectures in this comprehensive lecture. Delve into the application of TDA and machine learning for automated classification of multicellular structures in cancer EMT and embryonic development. Learn about characterizing epithelial migration phases, computing persistent homology, and using unsupervised classification for topological features. Discover how this model-agnostic approach can provide quantitative insights into complex tissue topology emergence through spatiotemporal cell interactions. Examine simulation results, parameter sweeps, phase diagrams, and experimental findings. Gain understanding of limitations, ongoing work, and future directions in this field of study.

Data-Driven Modeling & TDA of Self-Organized Multicellular Architectures

Applied Algebraic Topology Network
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