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Bioinformatics part 1 What is Bioinformatics

Bioinformatics part 2 Databases (protein and nucleotide)

Bioinformatics part 3 Sequence alignment introduction

Bioinformatics part 4 Introduction to FASTA and BLAST

Bioinformatics part 5 FASTA algorithm

Bioinformatics part 6 BLAST algorithm

Bioinformatics part 7 How to perform Global alignment 1

Bioinformatics part 8 How to perform Global alignment 2

Bioinformatics part 9 how to align sequences using trace back method

Bioinformatics part 10 How to perform local alignment

Bioinformatics part 11 Sequence motifs and PROSITE notations

Bioinformatics part 12 secondary structure prediction using Chou Fasman method

Bioinformatics part 13 how to calculate the propensity value

Bioinformatics par 14: Dot plot

Bioinformatics par 15 pairwise alignment

Bioinformatics part 16 evolution of bioinformatics tools

Bioinformatics part 17 homolog analog xenolog

Bioinformatics practical introduction

Bioinformatics Practical 1 database searching and retrival of sequence

Bioinformatics practical 2 how to run NCBI BLAST

Bioinformatics prac 3 Conserved domain search

Bioinformatics practical 4 multiple sequence alignment using ClustalW

Bioinformatics practical 5 Phylogenetic tree construction

Bioinformatics practical 6 Phylogenetic tree construction using MABL

Bioinformatics practical 7 Secondary structure prediction of proteins using SIB

Bioinformatics practical 7 secondary structure prediction 2

Bioinformatics practical 8 retrieving sequence fom Protein data bank

Bioinformatics practical 21 how to find transmembrane region in protein sequence

Bioinformatics practical 24 how to use PROSITESCAN

Bioinformatics practical 23 motif scan tool to identify known domains in protein sequence

Bioinformatics practical 22 how to search for known domains in protein sequence

Bioinformatics course 20 how to know the physicochemical properties of a protein

Bioinformatics practical 19 how to make a restriction map

Bioinformatics practical 18 how to predict translation product of a gene sequence?

Bioinformatics lecture 17 primer dimer check (bioinformatics practical)

Bioinformatics lecture 16 primer design

Bioinformatics lecture 15 how to screen vector contamination using vecscreen

Bioinformatics lecture 14 how to calculate % GC content and molecular weight of a gene

Bioinformatics lecture 12 ORF finder in NCBI (practical bioinformatics)

Bioinformatics lecture 11 gene centric databases (practical bioinformatics)

Bioinformatics lecture 10 whole genome database (practical bioinformatics)

Bioinformatics lecture 9 working with eukaryotic DNA (practical bioinformatics)

Description:

Dive into a comprehensive 10-hour course on bioinformatics, covering both theoretical concepts and practical applications. Learn about fundamental topics such as sequence alignment, FASTA and BLAST algorithms, global and local alignments, and secondary structure prediction. Explore various bioinformatics tools and databases, including NCBI BLAST, ClustalW, and Protein Data Bank. Gain hands-on experience with practical sessions on database searching, multiple sequence alignment, phylogenetic tree construction, and protein structure analysis. Master essential skills like primer design, restriction mapping, and identifying conserved domains in protein sequences. By the end of this course, develop a strong foundation in bioinformatics techniques and their applications in biological research.

Bioinformatics With Practical

Shomu's Biology

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#Data Science #Bioinformatics #Programming #Databases #Sequence Alignment

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